Publications

Eoin Quinn and, Marco Carobene and, Jean Quentin and, Sebastien Boyer, Miguel Arbesú Andrés, Oliver Bent (2025). GeoGraph: Geometric and Graph-based Ensemble Descriptors for Intrinsically Disordered Proteins. In Arxiv. Accepted in the NeurIPS 2025 AI for Science and Machine Learning and the Physical Sciences workshops.

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Ulrich A. Mbou Sob, Qiulin Li, Miguel Arbesú Andrés, Oliver Bent, Andries P. Smit, Arnu Pretorius (2024). Generative Model for Small Molecules with Latent Space RL Fine-Tuning to Protein Targets. In Arxiv.

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Denis Tarasov, Ulrich A. Mbou Sob, Miguel Arbesú Andrés, Nima Siboni, Sebastien Boyer, Marcin Skwark, Andries Smit, Oliver Bent, Arnu Pretorius (2023). Offline RL for generative design of protein binders. In BioRxiv. Accepted in the NeurIPS 2023 New Frontiers of AI for Drug Discovery and Development workshop.

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Cheng Zhang, Adam Leach, Thomas Makkink, Miguel Arbesú Andrés, Ibtissem Kadri, Daniel Luo, Liron Mizrahi, Sabrine Krichen, Maren Lang, Andrey Tovchigrechko, Nicolas Lopez Carranza, Uğur Şahin, Karim Beguir, Michael Rooney, Yunguan Fu (2023). FrameDiPT: SE(3) Diffusion Model for Protein Structure Inpainting. Accepted in Machine Learning in Structural Biology workshop, NeurIPS 2023..

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Marta F.M. Vieira, Guillem Hernández, Tiago Veloso, Hugo Monteiro, Miguel Arbesú Andrés, Andreas Zanzoni, Tiago N. Cordeiro (2021). The pathogen-encoded signaling receptor Tir exploits host-like intrinsic disorder to assist infection. Accepted in Nature Communications biology (February 2024). Find the published version here.

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Miguel Arbesú Andrés, Miquel Pons (2019). Integrating disorder in globular multidomain proteins: Fuzzy sensors and the role of SH3 domains. In Archives of Biochemistry and Biophysics.

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Anabel-Lise Le Roux, Irrem-Laareb Mohammad, Borja Mateos, Miguel Arbesú Andrés, Farman Ali Khan, João M.C. Teixeira, Miquel Pons (2019). A Myristoyl-Binding Site in the SH3 Domain Modulates c-Src Membrane Anchoring. In Iscience.

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João M.C. Teixeira, Simon P. Skinner, Miguel Arbesú Andrés, Alexander L. Breeze, Miquel Pons (2018). Farseer-NMR: Automatic Treatment, Analysis and Plotting of Large, Multi-Variable NMR Data. In Journal of Biomolecular NMR.

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Miguel Arbesú Andrés, Guillermo Iruela, Héctor Fuentes, João M.C. Teixeira, Miquel Pons (2018). Intramolecular Fuzzy Interactions Involving Intrinsically Disordered Domains. In Frontiers in Molecular Biosciences.

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Miguel Arbesú Andrés (2018). A novel regulatory unit in the N-terminal region of c-Src. Universitat de Barcelona.

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Miguel Arbesú Andrés, Mariano Maffei, Tiago N. Cordeiro, João M.C. Teixeira, Yolanda Pérez, Pau Bernadó, Serge Roche, Miquel Pons (2017). The Unique Domain Forms a Fuzzy Intramolecular Complex in Src Family Kinases. In Structure.

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Mariano Maffei, Miguel Arbesú Andrés, Anabel-Lise Le Roux, Irene Amata, Serge Roche, Miquel Pons (2015). The SH3 Domain Acts as a Scaffold for the N-Terminal Intrinsically Disordered Regions of c-Src. In Structure.

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Mariano Maffei, Irene Amata, Miguel Arbesú Andrés, Yolanda Pérez, Miquel Pons (2013). Lipid binding by disordered proteins. In Protocol Exchange.

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